Bio- ja siirdemeditsiini instituut

BSMI andmed

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1 to 10 of 39 Results

BSMI andmed(Tartu Ülikool) Bio- ja siirdemeditsiini instituudi teadustegevuse eesmärk on läbi viia nii biomeditsiini-alaseid alusuuringuid kui ka siirdemeditsiini rakendusuuringuid. The departments at the Institute of Biomedicine and Translational Medicine have diverse research interests with focus on molecular medicine that studies the causes and mechanisms of diseases and...
Sequence data of body site-specific microbiota during pregnancy Oct 20, 2025 - BSMI andmed Mändar, Reet; Kõljalg, Siiri; Štšepetova, Jelena, 2025, "Sequence data of body site-specific microbiota during pregnancy", https://doi.org/10.23673/RE-549, DATADOI, V1 The dataset comprises a total of 443 samples collected from 105 pregnant women. It contains sequence data derived from clinical material, obtained through 16S rRNA gene sequencing of DNA extracted from the following sample types: 85 vaginal, 84 cervical, 105 urine, 85 oral and 84 rectal samples.
All_samples.fastq.zip Oct 20, 2025 - Sequence data of body site-specific microbiota during pregnancy ZIP Archive - 32.1 GB - MD5: c5af8c13b870b883774af442afe2fb74 Experiment data sequencing
migratsioonieelne_statistika.html Oct 20, 2025 - Sequence data of body site-specific microbiota during pregnancy HTML - 10.1 KB - MD5: 99d4418db316a75af9a63563a6695bed 2026. aasta migratsiooni käigus varasemast DataDOI süsteemist üle kantud kasutusstatistika kajastab tegevust eelmises DSpace-põhises süsteemis ega näita Dataverse’i uusi kasutusandmeid. Usage statistics carried over from the previous DataDOI system as part of the 2026 migration reflect activity in the former DSpace-based system and do not represent...
README.txt Oct 20, 2025 - Sequence data of body site-specific microbiota during pregnancy Plain Text - 1.9 KB - MD5: 2b97f20d225d408e688de1fb63b090b7
Sequence data of HUMB collection 1.0 Aug 6, 2025 - BSMI andmed Mändar, Reet; Rööp, Tiiu, 2025, "Sequence data of HUMB collection 1.0", https://doi.org/10.23673/RE-536, DATADOI, V1 Human Microbiota Biobank (HUMB) at University of Tartu, Estonia, was established to support and promote research activities in the field of human microbiota. The collection contains more than 20,000 bacterial strains, both lactic acid bacteria and opportunistic bacteria. The dataset contains sequence data of a portion of the strains.
migratsioonieelne_statistika.html Aug 6, 2025 - Sequence data of HUMB collection 1.0 HTML - 9.9 KB - MD5: b0b3557eac1c1a3cb45d07ac15efb920 2026. aasta migratsiooni käigus varasemast DataDOI süsteemist üle kantud kasutusstatistika kajastab tegevust eelmises DSpace-põhises süsteemis ega näita Dataverse’i uusi kasutusandmeid. Usage statistics carried over from the previous DataDOI system as part of the 2026 migration reflect activity in the former DSpace-based system and do not represent...
README.txt Aug 6, 2025 - Sequence data of HUMB collection 1.0 Plain Text - 1.0 KB - MD5: 8289b8040d5de145ea27fd266e2555e7 Readme-file
Sequence_data_of_HUMB_collection_1.0.pdf Aug 6, 2025 - Sequence data of HUMB collection 1.0 Adobe PDF - 422.9 KB - MD5: 721dca9a7c8da3e820bda83c4cb866ea
Mother and child stool bacteriomes: links to maternal gestational diabetes and atopic dermatitis in 1–2-years-old children Apr 28, 2025 - BSMI andmed Alnek, Kristi; Bärenson, Anu; Aasmets, Oliver; Janson, Helis; Talja, Ija; Laht, Brita; Vorobjova, Tamara; Kirss, Anne; Cinek, Ondrej; Uibo, Raivo; Tagoma, Aili; HEDIMED Investigators group, 2025, "Mother and child stool bacteriomes: links to maternal gestational diabetes and atopic dermatitis in 1–2-years-old children", https://doi.org/10.23673/RE-512, DATADOI, V1 This file contains reads based on ASV data of the gut bacteriomes of mothers with and without GDM and those of their children (1-2 years old) resulting from the pregnancies.

BSMI andmed(Tartu Ülikool)

Bio- ja siirdemeditsiini instituudi teadustegevuse eesmärk on läbi viia nii biomeditsiini-alaseid alusuuringuid kui ka siirdemeditsiini rakendusuuringuid. The departments at the Institute of Biomedicine and Translational Medicine have diverse research interests with focus on molecular medicine that studies the causes and mechanisms of diseases and...

Sequence data of body site-specific microbiota during pregnancy

Oct 20, 2025 - BSMI andmed

Mändar, Reet; Kõljalg, Siiri; Štšepetova, Jelena, 2025, "Sequence data of body site-specific microbiota during pregnancy", https://doi.org/10.23673/RE-549, DATADOI, V1

The dataset comprises a total of 443 samples collected from 105 pregnant women. It contains sequence data derived from clinical material, obtained through 16S rRNA gene sequencing of DNA extracted from the following sample types: 85 vaginal, 84 cervical, 105 urine, 85 oral and 84 rectal samples.

All_samples.fastq.zip

Oct 20, 2025 - Sequence data of body site-specific microbiota during pregnancy

ZIP Archive - 32.1 GB -

Experiment data sequencing

migratsioonieelne_statistika.html

Oct 20, 2025 - Sequence data of body site-specific microbiota during pregnancy

HTML - 10.1 KB -

2026. aasta migratsiooni käigus varasemast DataDOI süsteemist üle kantud kasutusstatistika kajastab tegevust eelmises DSpace-põhises süsteemis ega näita Dataverse’i uusi kasutusandmeid. Usage statistics carried over from the previous DataDOI system as part of the 2026 migration reflect activity in the former DSpace-based system and do not represent...

README.txt

Oct 20, 2025 - Sequence data of body site-specific microbiota during pregnancy

Plain Text - 1.9 KB -

Sequence data of HUMB collection 1.0

Aug 6, 2025 - BSMI andmed

Mändar, Reet; Rööp, Tiiu, 2025, "Sequence data of HUMB collection 1.0", https://doi.org/10.23673/RE-536, DATADOI, V1

Human Microbiota Biobank (HUMB) at University of Tartu, Estonia, was established to support and promote research activities in the field of human microbiota. The collection contains more than 20,000 bacterial strains, both lactic acid bacteria and opportunistic bacteria. The dataset contains sequence data of a portion of the strains.

migratsioonieelne_statistika.html

Aug 6, 2025 - Sequence data of HUMB collection 1.0

HTML - 9.9 KB -

README.txt

Aug 6, 2025 - Sequence data of HUMB collection 1.0

Plain Text - 1.0 KB -

Readme-file

Sequence_data_of_HUMB_collection_1.0.pdf

Aug 6, 2025 - Sequence data of HUMB collection 1.0

Adobe PDF - 422.9 KB -

Mother and child stool bacteriomes: links to maternal gestational diabetes and atopic dermatitis in 1–2-years-old children

Apr 28, 2025 - BSMI andmed

Alnek, Kristi; Bärenson, Anu; Aasmets, Oliver; Janson, Helis; Talja, Ija; Laht, Brita; Vorobjova, Tamara; Kirss, Anne; Cinek, Ondrej; Uibo, Raivo; Tagoma, Aili; HEDIMED Investigators group, 2025, "Mother and child stool bacteriomes: links to maternal gestational diabetes and atopic dermatitis in 1–2-years-old children", https://doi.org/10.23673/RE-512, DATADOI, V1

This file contains reads based on ASV data of the gut bacteriomes of mothers with and without GDM and those of their children (1-2 years old) resulting from the pregnancies.

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